Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv16A0A0B4J1H3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Idnk-204ENSMUST00000226010 1898 ntBASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv16A0A0B4J1H3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv16A0A0B4J1H3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv16A0A0B4J1H3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv16A0A0B4J1H3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv16A0A0B4J1H3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv16A0A0B4J1H3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv16A0A0B4J1H3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms