Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm10698-201ENSMUST00000182663 604 ntBASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm37292-201ENSMUST00000192062 758 ntBASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm6576-201ENSMUST00000169678 883 ntBASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm27011-201ENSMUST00000182352 972 ntBASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.71■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.71■□□□□ 0.11
Trbv12-1A0A0B4J1H0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.71■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv12-1A0A0B4J1H0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.71■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.71■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gm43183-201ENSMUST00000200632 547 ntBASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms