Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trbv2A0A0B4J1G8 Gm9988-201ENSMUST00000069786 435 ntBASIC15.86■□□□□ 0.13
Trbv2A0A0B4J1G8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv2A0A0B4J1G8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv2A0A0B4J1G8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv2A0A0B4J1G8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv2A0A0B4J1G8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbv2A0A0B4J1G8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv2A0A0B4J1G8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv2A0A0B4J1G8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv2A0A0B4J1G8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.85■□□□□ 0.13
Trbv2A0A0B4J1G8 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Gm45417-201ENSMUST00000209533 758 ntBASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv2A0A0B4J1G8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv2A0A0B4J1G8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv2A0A0B4J1G8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trbv2A0A0B4J1G8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv2A0A0B4J1G8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv2A0A0B4J1G8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv2A0A0B4J1G8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms