Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv1A0A0B4J1G7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv1A0A0B4J1G7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trbv1A0A0B4J1G7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv1A0A0B4J1G7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14□□□□□ -0.17
Trbv1A0A0B4J1G7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv1A0A0B4J1G7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv1A0A0B4J1G7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14□□□□□ -0.17
Trbv1A0A0B4J1G7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv1A0A0B4J1G7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trbv1A0A0B4J1G7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Haglr-201ENSMUST00000100000 2085 ntBASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv1A0A0B4J1G7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv1A0A0B4J1G7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv1A0A0B4J1G7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trbv1A0A0B4J1G7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms