Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm18284-201ENSMUST00000172604 624 ntBASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm9988-201ENSMUST00000069786 435 ntBASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-6A0A075B6B2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Dancr-204ENSMUST00000132389 2347 ntBASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm5874-201ENSMUST00000096101 508 ntBASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-6A0A075B6B2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-6A0A075B6B2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-6A0A075B6B2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-6A0A075B6B2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-6A0A075B6B2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-6A0A075B6B2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-6A0A075B6B2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav6n-6A0A075B6B2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-6A0A075B6B2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-6A0A075B6B2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-6A0A075B6B2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-6A0A075B6B2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Gm8495-201ENSMUST00000188740 694 ntBASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-6A0A075B6B2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-6A0A075B6B2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms