Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-3A0A075B695 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-3A0A075B695 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-3A0A075B695 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trav9d-3A0A075B695 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav9d-3A0A075B695 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Gm15039-201ENSMUST00000118914 875 ntBASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-3A0A075B695 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9d-3A0A075B695 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Gm22325-201ENSMUST00000158904 308 ntBASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav9d-3A0A075B695 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-3A0A075B695 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav9d-3A0A075B695 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-3A0A075B695 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-3A0A075B695 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav9d-3A0A075B695 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav9d-3A0A075B695 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-3A0A075B695 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-3A0A075B695 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9d-3A0A075B695 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9d-3A0A075B695 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms