Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.83□□□□□ -0.36
Trav8-1A0A075B641 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav8-1A0A075B641 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav8-1A0A075B641 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav8-1A0A075B641 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav8-1A0A075B641 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms