Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Gm9988-201ENSMUST00000069786 435 ntBASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-1A0A075B5Z8 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Gm45417-201ENSMUST00000209533 758 ntBASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-1A0A075B5Z8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-1A0A075B5Z8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.33□□□□□ -0.11
Trav6-1A0A075B5Z8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-1A0A075B5Z8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-1A0A075B5Z8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-1A0A075B5Z8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms