Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm28883-201ENSMUST00000189256 369 ntBASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm19029-201ENSMUST00000189923 564 ntBASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm22897-202ENSMUST00000197782 127 ntBASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm38670-201ENSMUST00000199248 77 ntBASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm8137-201ENSMUST00000218997 463 ntBASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.24□□□□□ -1.57
Upk3aQ9JKX8 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 AW046200-203ENSMUST00000211787 2479 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm6134-201ENSMUST00000117265 171 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm15490-201ENSMUST00000119894 387 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm13533-201ENSMUST00000121104 177 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm24940-201ENSMUST00000158326 108 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm22361-201ENSMUST00000158435 176 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Mir6539-201ENSMUST00000183732 110 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm27225-201ENSMUST00000183833 557 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm27781-201ENSMUST00000185185 92 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm29755-201ENSMUST00000196976 948 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm6543-201ENSMUST00000197353 808 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm44623-201ENSMUST00000207934 434 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm7688-201ENSMUST00000212857 337 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Olfr192-201ENSMUST00000080251 925 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Snora30-201ENSMUST00000083325 130 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 BC055308-201ENSMUST00000193380 2538 ntBASIC5.23□□□□□ -1.57
Upk3aQ9JKX8 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Gm22370-201ENSMUST00000102422 83 ntBASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Upk3aQ9JKX8 Gm28943-201ENSMUST00000186187 615 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms