Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm24886-201ENSMUST00000104384 123 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm11533-201ENSMUST00000120287 477 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm22993-201ENSMUST00000175423 254 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Mir7082-201ENSMUST00000183526 92 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm28640-201ENSMUST00000190918 550 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm37492-201ENSMUST00000191948 376 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm10709-201ENSMUST00000213318 480 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Lima1Q9ERG0 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm13013-201ENSMUST00000119087 523 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm15981-201ENSMUST00000119196 457 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm14938-201ENSMUST00000119482 943 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm21999-201ENSMUST00000165985 387 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm27266-201ENSMUST00000184521 123 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm43444-201ENSMUST00000198123 291 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm43501-201ENSMUST00000202513 107 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm45525-201ENSMUST00000210800 389 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lima1Q9ERG0 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.27□□□□□ -1.57
Lima1Q9ERG0 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms