Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cdc40Q9DC48 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm11908-201ENSMUST00000117755 347 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm14563-201ENSMUST00000120571 354 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm15044-201ENSMUST00000120703 598 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm26086-201ENSMUST00000157902 263 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm17142-201ENSMUST00000164933 645 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm21999-201ENSMUST00000165985 387 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm42522-201ENSMUST00000196071 255 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm22897-202ENSMUST00000197782 127 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm43148-201ENSMUST00000198237 520 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm8039-201ENSMUST00000204758 712 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm45870-201ENSMUST00000211269 601 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm20786-201ENSMUST00000212649 436 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Gm23330-201ENSMUST00000082660 164 ntBASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdc40Q9DC48 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm25906-201ENSMUST00000158489 126 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm17046-201ENSMUST00000168078 850 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm27037-201ENSMUST00000182270 960 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm27985-201ENSMUST00000185112 378 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm4322-201ENSMUST00000191094 336 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm43516-201ENSMUST00000196891 322 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm43084-201ENSMUST00000200696 947 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm4374-201ENSMUST00000204929 424 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 AC211878.5-201ENSMUST00000221697 409 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdc40Q9DC48 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.14□□□□□ -1.59
Cdc40Q9DC48 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdc40Q9DC48 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 153.4 ms