Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm12890-201ENSMUST00000120885 373 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm22492-201ENSMUST00000157192 297 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm6872-201ENSMUST00000165001 700 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm20620-201ENSMUST00000177528 168 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm8419-201ENSMUST00000189886 412 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm37177-201ENSMUST00000193768 417 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm6520-201ENSMUST00000200636 410 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm44312-201ENSMUST00000203536 469 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm43974-201ENSMUST00000205080 684 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm5418-201ENSMUST00000206932 528 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm31166-201ENSMUST00000209326 288 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm6906-201ENSMUST00000218014 569 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm5176-201ENSMUST00000218244 1227 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm7887-201ENSMUST00000056948 537 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ska1Q9CPV1 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm24434-201ENSMUST00000104081 132 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm25917-201ENSMUST00000104267 130 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Mir292-201ENSMUST00000104847 82 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm15618-201ENSMUST00000121610 452 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm22867-201ENSMUST00000157499 109 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm23082-201ENSMUST00000157852 133 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm24179-201ENSMUST00000158925 127 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm27468-201ENSMUST00000183577 106 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm37336-202ENSMUST00000193705 468 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm9317-201ENSMUST00000197055 862 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm43895-201ENSMUST00000203219 855 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm43946-201ENSMUST00000204058 886 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm7990-201ENSMUST00000212126 593 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm18413-201ENSMUST00000221573 655 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm23737-201ENSMUST00000082547 159 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm24207-201ENSMUST00000082781 108 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ska1Q9CPV1 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms