Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm43405-201ENSMUST00000198642 337 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm44134-202ENSMUST00000204777 545 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm15752-201ENSMUST00000117427 394 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm16007-201ENSMUST00000117837 286 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm11245-201ENSMUST00000119419 1037 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm11584-201ENSMUST00000120636 325 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm23082-201ENSMUST00000157852 133 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm45539-201ENSMUST00000210313 428 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Mir5710-201ENSMUST00000176884 69 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm5285-201ENSMUST00000193089 666 ntBASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdh23Q99PF4 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm16394-201ENSMUST00000117289 675 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm14933-201ENSMUST00000118840 481 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm13220-201ENSMUST00000121535 508 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm22986-201ENSMUST00000122753 130 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm24031-201ENSMUST00000083930 131 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 AC154358.1-201ENSMUST00000224871 218 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdh23Q99PF4 Tfcp2l1-201ENSMUST00000027629 9269 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm23485-201ENSMUST00000104181 155 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm13367-201ENSMUST00000119955 796 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm38040-201ENSMUST00000193505 225 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm36981-201ENSMUST00000192340 4485 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Cdh23Q99PF4 Gm24170-201ENSMUST00000104124 133 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms