Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm15076-201ENSMUST00000117076 474 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm15312-201ENSMUST00000118827 271 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm13865-201ENSMUST00000120957 865 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm15379-201ENSMUST00000121224 648 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm15309-201ENSMUST00000121644 240 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm26159-201ENSMUST00000158968 104 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm3141-201ENSMUST00000168726 499 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm21758-201ENSMUST00000179336 819 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm8192-201ENSMUST00000182196 958 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm18667-201ENSMUST00000186523 484 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm29519-201ENSMUST00000186994 398 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm29647-201ENSMUST00000188795 666 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm6693-201ENSMUST00000189583 813 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm28504-201ENSMUST00000190977 666 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm18407-201ENSMUST00000192126 790 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm31511-201ENSMUST00000193134 657 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm35843-201ENSMUST00000193716 666 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm43224-201ENSMUST00000201567 898 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm7890-201ENSMUST00000204877 601 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm18467-201ENSMUST00000208805 434 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm33312-201ENSMUST00000222443 332 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 AC159205.4-201ENSMUST00000225964 704 ntBASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Clp1Q99LI9 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Clp1Q99LI9 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 AC121094.1-201ENSMUST00000224766 1345 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm18954-201ENSMUST00000222200 1792 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm22371-201ENSMUST00000104588 130 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm25507-201ENSMUST00000116981 144 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm12099-201ENSMUST00000118660 750 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm15621-201ENSMUST00000119162 364 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm11943-201ENSMUST00000119473 327 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm14038-201ENSMUST00000121500 807 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm27854-201ENSMUST00000175578 244 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm27539-201ENSMUST00000184971 224 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm43227-201ENSMUST00000202239 677 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm31861-201ENSMUST00000204563 672 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm20997-201ENSMUST00000205148 231 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm7530-201ENSMUST00000218466 605 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 AC127279.1-201ENSMUST00000220140 637 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms