Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm38360-201ENSMUST00000195130 454 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm43444-201ENSMUST00000198123 291 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm45525-201ENSMUST00000210800 389 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Mir375-201ENSMUST00000083682 64 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Olfr467-201ENSMUST00000084756 927 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm8424-201ENSMUST00000117716 988 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm11902-201ENSMUST00000118849 270 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm15754-201ENSMUST00000119191 478 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm8545-201ENSMUST00000120692 801 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm13162-201ENSMUST00000121481 454 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm14237-201ENSMUST00000122080 430 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm23903-201ENSMUST00000157566 131 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm23280-201ENSMUST00000157905 139 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm23855-201ENSMUST00000158377 135 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm10087-201ENSMUST00000167650 330 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm22655-201ENSMUST00000174949 96 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm1972-201ENSMUST00000181606 964 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm29201-201ENSMUST00000189120 431 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm19060-201ENSMUST00000201959 421 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm43928-201ENSMUST00000203737 409 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm44214-201ENSMUST00000204153 606 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Olfr519-201ENSMUST00000084752 960 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Lsm1Q8VC85 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms