Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ccdc9Q8VC31 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
Ccdc9Q8VC31 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Dbpht2-202ENSMUST00000221311 5341 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm26106-201ENSMUST00000157254 228 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm22764-201ENSMUST00000158370 92 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm16298-201ENSMUST00000161107 420 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm28118-201ENSMUST00000185957 294 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm21139-201ENSMUST00000186594 877 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm37631-201ENSMUST00000192275 364 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm37463-201ENSMUST00000193819 796 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm37215-201ENSMUST00000194927 1259 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm2142-201ENSMUST00000197899 589 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm43344-201ENSMUST00000198723 1229 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 AC153522.1-201ENSMUST00000220047 1090 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
Ccdc9Q8VC31 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm12101-201ENSMUST00000121590 390 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm7973-201ENSMUST00000122107 488 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm24690-201ENSMUST00000157759 97 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Trbv10-201ENSMUST00000168322 289 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm37492-201ENSMUST00000191948 376 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm18692-201ENSMUST00000193047 511 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm19088-201ENSMUST00000198800 566 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 CT030194.1-201ENSMUST00000225507 532 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Mir99a-201ENSMUST00000083596 65 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Mir504-201ENSMUST00000093602 79 ntBASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc9Q8VC31 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms