Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm11908-201ENSMUST00000117755 347 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm15233-201ENSMUST00000118747 400 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm12577-201ENSMUST00000119701 574 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm15044-201ENSMUST00000120703 598 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm9428-201ENSMUST00000127214 769 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm22916-201ENSMUST00000157616 119 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm26170-201ENSMUST00000158419 148 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm22993-201ENSMUST00000175423 254 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm2367-201ENSMUST00000192374 472 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm34768-201ENSMUST00000193884 565 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm37576-201ENSMUST00000194228 372 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Gm45628-201ENSMUST00000210849 274 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm23294-201ENSMUST00000104150 164 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm9432-201ENSMUST00000117810 759 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm15780-201ENSMUST00000121283 935 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm22311-201ENSMUST00000158006 110 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm23777-201ENSMUST00000158994 259 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Atp2b4-208ENSMUST00000167348 243 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm28507-201ENSMUST00000189737 703 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Gm45608-201ENSMUST00000210948 389 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 AC102352.1-201ENSMUST00000224187 582 ntBASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Brf1Q8CFK2 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms