Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.56□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc28aQ8CEI3 Gm23511-201ENSMUST00000083084 164 ntBASIC5.56□□□□□ -1.52
Ccdc28aQ8CEI3 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc28aQ8CEI3 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc28aQ8CEI3 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc28aQ8CEI3 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Ccdc28aQ8CEI3 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28aQ8CEI3 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28aQ8CEI3 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc28aQ8CEI3 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm23593-201ENSMUST00000104309 120 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm15772-201ENSMUST00000118533 438 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm12189-201ENSMUST00000119779 912 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm13438-201ENSMUST00000120100 573 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm23774-201ENSMUST00000158990 131 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm6472-201ENSMUST00000178147 651 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Mir7058-201ENSMUST00000184637 75 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm19060-201ENSMUST00000201959 421 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28aQ8CEI3 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm14560-201ENSMUST00000118672 375 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm15981-201ENSMUST00000119196 457 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm12303-201ENSMUST00000119506 673 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm25117-201ENSMUST00000157194 144 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm23896-201ENSMUST00000158109 130 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm20530-201ENSMUST00000174261 254 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm24957-201ENSMUST00000179604 132 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm44673-201ENSMUST00000205692 996 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm45700-201ENSMUST00000205866 347 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm45185-201ENSMUST00000207556 404 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm44892-201ENSMUST00000208595 488 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc28aQ8CEI3 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28aQ8CEI3 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc28aQ8CEI3 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc28aQ8CEI3 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.53□□□□□ -1.52
Ccdc28aQ8CEI3 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28aQ8CEI3 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28aQ8CEI3 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.53□□□□□ -1.52
Ccdc28aQ8CEI3 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.53□□□□□ -1.52
Ccdc28aQ8CEI3 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28aQ8CEI3 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Ccdc28aQ8CEI3 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms