Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm12110-201ENSMUST00000121601 579 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm23774-201ENSMUST00000158990 131 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm33601-201ENSMUST00000210001 961 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm45525-201ENSMUST00000210800 389 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm45777-201ENSMUST00000213009 301 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm18871-201ENSMUST00000218655 745 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Mir133b-201ENSMUST00000083546 119 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.47□□□□□ -1.37
Nup88Q8CEC0 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup88Q8CEC0 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.46□□□□□ -1.37
Nup88Q8CEC0 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.46□□□□□ -1.37
Nup88Q8CEC0 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.46□□□□□ -1.37
Nup88Q8CEC0 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.46□□□□□ -1.37
Nup88Q8CEC0 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.46□□□□□ -1.37
Nup88Q8CEC0 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm13579-201ENSMUST00000118519 517 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm13537-201ENSMUST00000120467 267 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm24477-201ENSMUST00000157438 103 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm22730-201ENSMUST00000158085 171 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Mir6903-201ENSMUST00000183597 88 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm28507-201ENSMUST00000189737 703 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm37503-201ENSMUST00000192088 319 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm37676-201ENSMUST00000195496 507 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm8672-201ENSMUST00000221200 332 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Gm7768-201ENSMUST00000222988 597 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 AC158142.3-201ENSMUST00000226230 675 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Nup88Q8CEC0 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Nup88Q8CEC0 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Nup88Q8CEC0 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.45□□□□□ -1.38
Nup88Q8CEC0 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Nup88Q8CEC0 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.45□□□□□ -1.38
Nup88Q8CEC0 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Nup88Q8CEC0 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Nup88Q8CEC0 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Nup88Q8CEC0 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Nup88Q8CEC0 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Nup88Q8CEC0 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Nup88Q8CEC0 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms