Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Gm24871-201ENSMUST00000083099 116 ntBASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Rnu5g-201ENSMUST00000093721 116 ntBASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ccdc87Q8CDL9 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm5583-201ENSMUST00000174328 1519 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm11970-201ENSMUST00000116105 320 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm6446-201ENSMUST00000120604 818 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm16471-201ENSMUST00000121940 618 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm24417-201ENSMUST00000178123 79 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm24653-201ENSMUST00000178541 79 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm25934-201ENSMUST00000178642 79 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm21045-201ENSMUST00000183058 1020 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm4332-201ENSMUST00000196114 346 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm44281-201ENSMUST00000203090 166 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm44053-201ENSMUST00000203364 929 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm4083-201ENSMUST00000207158 451 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm45734-201ENSMUST00000211916 411 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm5649-201ENSMUST00000217918 951 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm8412-201ENSMUST00000077493 440 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ccdc87Q8CDL9 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Gm3089-201ENSMUST00000200804 1395 ntBASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Gm3302-201ENSMUST00000201462 1395 ntBASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Gm15779-201ENSMUST00000117470 412 ntBASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.24□□□□□ -1.41
Ccdc87Q8CDL9 Gm13835-201ENSMUST00000118459 685 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms