Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm14220-201ENSMUST00000118114 449 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm4617-201ENSMUST00000178993 331 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Mir6903-201ENSMUST00000183597 88 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm28066-201ENSMUST00000188657 472 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm29592-201ENSMUST00000189434 370 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm28926-201ENSMUST00000191063 680 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm38330-201ENSMUST00000192743 959 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm37341-201ENSMUST00000194680 371 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm18944-201ENSMUST00000207672 643 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm31166-201ENSMUST00000209326 288 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm45874-201ENSMUST00000212423 346 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Vps53Q8CCB4 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm24230-201ENSMUST00000104313 129 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm16007-201ENSMUST00000117837 286 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm13593-201ENSMUST00000121329 692 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm15335-201ENSMUST00000122442 411 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm26489-201ENSMUST00000157880 264 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm24216-201ENSMUST00000158259 117 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm24767-201ENSMUST00000158509 95 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm16285-201ENSMUST00000162999 347 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm23631-201ENSMUST00000175291 123 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Gm29124-201ENSMUST00000186576 452 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.66□□□□□ -1.34
Vps53Q8CCB4 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms