Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.61□□□□□ -1.51
Rfx6Q8C7R7 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm20486-201ENSMUST00000101544 128 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm22709-201ENSMUST00000116893 111 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm15781-201ENSMUST00000120216 323 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm13578-201ENSMUST00000120849 590 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm24477-201ENSMUST00000157438 103 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm23995-201ENSMUST00000158060 129 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm22852-201ENSMUST00000177899 101 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.6□□□□□ -1.51
Rfx6Q8C7R7 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm11774-201ENSMUST00000118601 293 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm14831-201ENSMUST00000120253 409 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm14620-201ENSMUST00000120656 383 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm12618-201ENSMUST00000121754 483 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm16125-201ENSMUST00000159003 339 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm16139-201ENSMUST00000160015 420 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm22993-201ENSMUST00000175423 254 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm8993-201ENSMUST00000182182 983 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm28527-201ENSMUST00000185210 297 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm18553-201ENSMUST00000194152 634 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm38360-201ENSMUST00000195130 454 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm42437-201ENSMUST00000197263 923 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm44463-201ENSMUST00000198895 137 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm43629-201ENSMUST00000201782 704 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx6Q8C7R7 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms