Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Slc17a1-202ENSMUST00000110413 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim35Q8C006 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim35Q8C006 Mlst8-202ENSMUST00000179163 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Trim35Q8C006 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm2136-201ENSMUST00000193945 2577 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm22471-201ENSMUST00000104116 130 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim35Q8C006 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm8832-201ENSMUST00000119890 395 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm11796-201ENSMUST00000120208 972 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim35Q8C006 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm3242-201ENSMUST00000171273 485 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm20415-201ENSMUST00000172877 423 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm26977-201ENSMUST00000183151 996 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm4208-201ENSMUST00000189802 871 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm35106-201ENSMUST00000192731 250 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm7369-201ENSMUST00000192738 936 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC8.55□□□□□ -1.04
Trim35Q8C006 Ckb-ps1-201ENSMUST00000199192 1127 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm45236-201ENSMUST00000208632 229 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm45724-201ENSMUST00000213031 420 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm7695-201ENSMUST00000220900 641 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 AC159244.1-201ENSMUST00000220964 594 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 AC121599.1-201ENSMUST00000224276 449 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 AC124395.1-201ENSMUST00000225940 707 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Dixdc1-206ENSMUST00000120622 1379 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 AC125532.1-201ENSMUST00000216210 2334 ntBASIC8.55□□□□□ -1.04
Trim35Q8C006 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim35Q8C006 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim35Q8C006 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trim35Q8C006 Cep41-201ENSMUST00000031810 3447 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Cecr2-201ENSMUST00000100993 4849 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trim35Q8C006 Mb21d2-201ENSMUST00000100023 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim35Q8C006 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim35Q8C006 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Cd99l2-202ENSMUST00000080035 3327 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Olfm5-201ENSMUST00000051137 2268 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trim35Q8C006 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Tubd1-202ENSMUST00000069503 1871 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Trav9n-4-201ENSMUST00000103626 595 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm23127-201ENSMUST00000104261 130 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm8662-201ENSMUST00000118644 574 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Rpl36-ps1-201ENSMUST00000119508 303 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm2005-201ENSMUST00000120759 542 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm7327-201ENSMUST00000120925 652 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Itih5l-ps-202ENSMUST00000148862 808 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm16353-201ENSMUST00000159458 1223 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Mir7659-201ENSMUST00000184079 58 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Scgb1b12-201ENSMUST00000188355 417 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm28361-201ENSMUST00000188825 474 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm19196-202ENSMUST00000210709 321 ntTSL 2 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm19196-203ENSMUST00000211164 363 ntTSL 2 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm45473-201ENSMUST00000211452 616 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 AC126267.1-201ENSMUST00000214282 284 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm18188-201ENSMUST00000219386 478 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Taf1b-203ENSMUST00000222710 521 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Fam209-201ENSMUST00000029007 698 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm22422-201ENSMUST00000083060 135 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms