Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Sh3rf2Q8BZT2 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.82□□□□□ -1.48
Sh3rf2Q8BZT2 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Sh3rf2Q8BZT2 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf2Q8BZT2 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sh3rf2Q8BZT2 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf2Q8BZT2 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.82□□□□□ -1.48
Sh3rf2Q8BZT2 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.82□□□□□ -1.48
Sh3rf2Q8BZT2 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sh3rf2Q8BZT2 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm24265-201ENSMUST00000101833 141 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm14388-201ENSMUST00000118119 477 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm12327-201ENSMUST00000121729 1168 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm26172-201ENSMUST00000158421 134 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm25906-201ENSMUST00000158489 126 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm17142-201ENSMUST00000164933 645 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm22122-201ENSMUST00000175147 200 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm24407-201ENSMUST00000177864 141 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 V1rg10-201ENSMUST00000183378 937 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28917-201ENSMUST00000187294 237 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm29376-201ENSMUST00000189357 835 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm8826-201ENSMUST00000193161 948 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm36974-201ENSMUST00000194200 1071 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm18702-201ENSMUST00000196923 588 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm29736-201ENSMUST00000198189 385 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm43148-201ENSMUST00000198237 520 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm43973-201ENSMUST00000203562 210 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm43992-201ENSMUST00000204358 197 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 Gm7990-201ENSMUST00000212126 593 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 AC183092.2-201ENSMUST00000225542 1153 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 AC132918.1-201ENSMUST00000227877 925 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 AC125464.1-201ENSMUST00000228013 512 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.81□□□□□ -1.48
Sh3rf2Q8BZT2 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms