Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Foxc1Q61572 Gm17841-201ENSMUST00000210711 2425 ntBASIC5.69□□□□□ -1.5
Foxc1Q61572 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Foxc1Q61572 Grik1-209ENSMUST00000227986 2942 ntBASIC5.69□□□□□ -1.5
Foxc1Q61572 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Foxc1Q61572 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Foxc1Q61572 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Foxc1Q61572 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
Foxc1Q61572 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Foxc1Q61572 Gm45534-201ENSMUST00000211449 2339 ntBASIC5.69□□□□□ -1.5
Foxc1Q61572 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Foxc1Q61572 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Foxc1Q61572 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Foxc1Q61572 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Foxc1Q61572 Gm14390-201ENSMUST00000117505 1695 ntBASIC5.69□□□□□ -1.5
Foxc1Q61572 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Foxc1Q61572 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Foxc1Q61572 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Foxc1Q61572 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Foxc1Q61572 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Foxc1Q61572 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Foxc1Q61572 Gm43961-201ENSMUST00000203289 1872 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm45358-201ENSMUST00000209492 2305 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm38218-201ENSMUST00000193555 4689 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm22660-201ENSMUST00000104193 130 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm7785-201ENSMUST00000117121 892 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm8250-201ENSMUST00000117398 774 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm14736-201ENSMUST00000121470 336 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.68□□□□□ -1.5
Foxc1Q61572 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm24347-201ENSMUST00000158711 142 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm7925-201ENSMUST00000166690 401 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm22646-201ENSMUST00000175130 115 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm44370-201ENSMUST00000175436 112 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm27435-201ENSMUST00000183588 88 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm2147-201ENSMUST00000193588 639 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm42832-201ENSMUST00000196361 745 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm42932-201ENSMUST00000197280 744 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm30517-201ENSMUST00000197350 772 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm42965-201ENSMUST00000201254 250 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm44431-201ENSMUST00000203500 413 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Foxc1Q61572 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 AC122360.1-201ENSMUST00000217737 624 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm2446-201ENSMUST00000220144 772 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm46369-201ENSMUST00000221577 401 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 CT030260.1-201ENSMUST00000223243 442 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 AC124397.1-201ENSMUST00000224296 653 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Snora9-201ENSMUST00000082579 133 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm17199-201ENSMUST00000097296 416 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm37334-201ENSMUST00000192325 2938 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 AC102369.2-201ENSMUST00000219725 1679 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC5.68□□□□□ -1.5
Foxc1Q61572 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Tmem161b-206ENSMUST00000225069 2414 ntBASIC5.68□□□□□ -1.5
Foxc1Q61572 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Foxc1Q61572 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Foxc1Q61572 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms