Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Col17a1Q07563 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
Col17a1Q07563 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Col17a1Q07563 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC8.6□□□□□ -1.03
Col17a1Q07563 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm43842-201ENSMUST00000202890 2982 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Thap6-201ENSMUST00000191860 3151 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm28379-202ENSMUST00000187676 2896 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm45644-201ENSMUST00000210255 2740 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col17a1Q07563 AC154841.1-201ENSMUST00000227263 1479 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm42885-201ENSMUST00000200763 4214 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm11385-201ENSMUST00000121513 570 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm26069-201ENSMUST00000157497 277 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm4207-201ENSMUST00000173144 960 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm22411-201ENSMUST00000175462 126 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm22002-201ENSMUST00000175622 125 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm23860-201ENSMUST00000179446 132 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm29650-201ENSMUST00000188485 742 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col17a1Q07563 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC8.59□□□□□ -1.03
Col17a1Q07563 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col17a1Q07563 CT025523.1-201ENSMUST00000228318 694 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 AC133189.2-201ENSMUST00000228527 392 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Col17a1Q07563 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Col17a1Q07563 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Col17a1Q07563 AC129085.2-201ENSMUST00000223763 2800 ntBASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
Col17a1Q07563 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Col17a1Q07563 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col17a1Q07563 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Col17a1Q07563 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC8.59□□□□□ -1.03
Col17a1Q07563 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col17a1Q07563 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Col17a1Q07563 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm14791-201ENSMUST00000119061 1166 ntBASIC8.58□□□□□ -1.04
Col17a1Q07563 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC8.58□□□□□ -1.04
Col17a1Q07563 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm5558-201ENSMUST00000178933 495 ntBASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm4842-201ENSMUST00000183237 835 ntBASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm44038-201ENSMUST00000203952 889 ntBASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm37151-201ENSMUST00000194631 5007 ntBASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col17a1Q07563 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC8.58□□□□□ -1.04
Col17a1Q07563 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Mir761-201ENSMUST00000103245 76 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm23501-201ENSMUST00000157744 256 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm23945-201ENSMUST00000179609 92 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms