Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm5285-201ENSMUST00000193089 666 ntBASIC3.59□□□□□ -1.83
PrkdcP97313 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
PrkdcP97313 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm45477-201ENSMUST00000200213 5498 ntBASIC3.59□□□□□ -1.83
PrkdcP97313 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
PrkdcP97313 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 AC124183.1-201ENSMUST00000222367 2135 ntBASIC3.59□□□□□ -1.83
PrkdcP97313 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm42843-201ENSMUST00000196328 3616 ntBASIC3.59□□□□□ -1.83
PrkdcP97313 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PrkdcP97313 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm3145-201ENSMUST00000188584 220 ntBASIC3.59□□□□□ -1.83
PrkdcP97313 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm24763-201ENSMUST00000083688 190 ntBASIC3.59□□□□□ -1.83
PrkdcP97313 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC3.59□□□□□ -1.83
PrkdcP97313 Gm37090-201ENSMUST00000195694 4105 ntBASIC3.59□□□□□ -1.83
PrkdcP97313 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PrkdcP97313 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
PrkdcP97313 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC3.59□□□□□ -1.83
PrkdcP97313 Gm45651-201ENSMUST00000210857 335 ntBASIC3.59□□□□□ -1.83
PrkdcP97313 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
PrkdcP97313 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PrkdcP97313 n-R5s88-201ENSMUST00000083173 118 ntBASIC3.59□□□□□ -1.83
PrkdcP97313 Gm23099-201ENSMUST00000083454 139 ntBASIC3.59□□□□□ -1.83
PrkdcP97313 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC3.59□□□□□ -1.84
PrkdcP97313 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.84
PrkdcP97313 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Gm19035-201ENSMUST00000193299 1742 ntBASIC3.59□□□□□ -1.84
PrkdcP97313 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Gm18864-201ENSMUST00000194518 1051 ntBASIC3.59□□□□□ -1.84
PrkdcP97313 Gm44234-201ENSMUST00000204246 900 ntBASIC3.59□□□□□ -1.84
PrkdcP97313 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.59□□□□□ -1.84
PrkdcP97313 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 AC154527.3-201ENSMUST00000225519 989 ntBASIC3.59□□□□□ -1.84
PrkdcP97313 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PrkdcP97313 Gm37696-201ENSMUST00000194223 3349 ntBASIC3.59□□□□□ -1.84
PrkdcP97313 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PrkdcP97313 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PrkdcP97313 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
PrkdcP97313 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PrkdcP97313 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PrkdcP97313 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PrkdcP97313 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC3.58□□□□□ -1.84
PrkdcP97313 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PrkdcP97313 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PrkdcP97313 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PrkdcP97313 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PrkdcP97313 Gm43426-201ENSMUST00000197287 2597 ntBASIC3.58□□□□□ -1.84
PrkdcP97313 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PrkdcP97313 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms