Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
NcanP55066 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.97□□□□□ -1.45
NcanP55066 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
NcanP55066 Gm24429-201ENSMUST00000104076 132 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm24403-201ENSMUST00000104616 130 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm11972-201ENSMUST00000118514 389 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm4911-201ENSMUST00000119388 945 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm6584-201ENSMUST00000119671 447 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm7079-201ENSMUST00000119726 171 ntBASIC5.97□□□□□ -1.45
NcanP55066 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Gm25913-201ENSMUST00000157617 135 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm22501-201ENSMUST00000158981 127 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm16114-201ENSMUST00000161930 300 ntBASIC5.97□□□□□ -1.45
NcanP55066 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Mir7014-201ENSMUST00000183853 63 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm37882-201ENSMUST00000195254 196 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm8861-201ENSMUST00000196346 832 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm8891-201ENSMUST00000198546 832 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.97□□□□□ -1.45
NcanP55066 Gm44002-201ENSMUST00000205134 594 ntBASIC5.97□□□□□ -1.45
NcanP55066 Gm19880-201ENSMUST00000207731 318 ntBASIC5.97□□□□□ -1.45
NcanP55066 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.97□□□□□ -1.45
NcanP55066 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
NcanP55066 Gm23624-201ENSMUST00000082463 321 ntBASIC5.97□□□□□ -1.45
NcanP55066 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC5.97□□□□□ -1.45
NcanP55066 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
NcanP55066 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.97□□□□□ -1.45
NcanP55066 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.97□□□□□ -1.45
NcanP55066 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NcanP55066 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.96□□□□□ -1.45
NcanP55066 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
NcanP55066 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
NcanP55066 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.96□□□□□ -1.45
NcanP55066 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
NcanP55066 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.96□□□□□ -1.45
NcanP55066 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
NcanP55066 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.96□□□□□ -1.46
NcanP55066 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
NcanP55066 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
NcanP55066 Gm14304-201ENSMUST00000117272 446 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm14755-201ENSMUST00000118037 384 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm11346-201ENSMUST00000118346 704 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm11987-201ENSMUST00000118524 381 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm26069-201ENSMUST00000157497 277 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm22916-201ENSMUST00000157616 119 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
NcanP55066 Gm8256-201ENSMUST00000169178 453 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
NcanP55066 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NcanP55066 Gm2914-201ENSMUST00000186120 328 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm29650-201ENSMUST00000188485 742 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.96□□□□□ -1.46
NcanP55066 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.96□□□□□ -1.46
NcanP55066 Gm4602-201ENSMUST00000203198 308 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm45700-201ENSMUST00000205866 347 ntBASIC5.96□□□□□ -1.46
NcanP55066 Gm44580-201ENSMUST00000206333 877 ntBASIC5.96□□□□□ -1.46
NcanP55066 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
NcanP55066 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.96□□□□□ -1.46
NcanP55066 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.96□□□□□ -1.46
NcanP55066 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.96□□□□□ -1.46
NcanP55066 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.96□□□□□ -1.46
NcanP55066 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.96□□□□□ -1.46
NcanP55066 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NcanP55066 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
NcanP55066 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
NcanP55066 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
NcanP55066 AC158938.1-201ENSMUST00000225372 6720 ntBASIC5.96□□□□□ -1.46
NcanP55066 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NcanP55066 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
NcanP55066 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NcanP55066 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
NcanP55066 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NcanP55066 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
NcanP55066 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
NcanP55066 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
NcanP55066 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
NcanP55066 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Gm23193-201ENSMUST00000102427 82 ntBASIC5.95□□□□□ -1.46
NcanP55066 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NcanP55066 Gm24541-201ENSMUST00000103871 96 ntBASIC5.95□□□□□ -1.46
NcanP55066 Gm15828-201ENSMUST00000119911 522 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms