Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm25345-201ENSMUST00000104505 133 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Sox1P53783 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 Gm12102-201ENSMUST00000118251 604 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Gm16423-201ENSMUST00000120078 947 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Gm14038-201ENSMUST00000121500 807 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Gm7973-201ENSMUST00000122107 488 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Mir1903-201ENSMUST00000122574 80 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Gm23883-201ENSMUST00000122686 290 ntBASIC6.77□□□□□ -1.33
Sox1P53783 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC6.77□□□□□ -1.33
Sox1P53783 Gm9498-201ENSMUST00000140849 291 ntBASIC6.77□□□□□ -1.33
Sox1P53783 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.77□□□□□ -1.33
Sox1P53783 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC6.77□□□□□ -1.33
Sox1P53783 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 Gm22755-201ENSMUST00000157143 100 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Mir3078-201ENSMUST00000175231 87 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Sox1P53783 Gm28343-201ENSMUST00000185386 112 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Gm3454-201ENSMUST00000185571 412 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Gm3605-201ENSMUST00000185858 440 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Ighv1-68-201ENSMUST00000198789 294 ntBASIC6.77□□□□□ -1.33
Sox1P53783 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.77□□□□□ -1.33
Sox1P53783 Gm18997-201ENSMUST00000216353 822 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.77□□□□□ -1.33
Sox1P53783 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.77□□□□□ -1.33
Sox1P53783 AC159619.2-201ENSMUST00000222924 401 ntBASIC6.77□□□□□ -1.33
Sox1P53783 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Sox1P53783 Rny3-201ENSMUST00000083011 102 ntBASIC6.77□□□□□ -1.33
Sox1P53783 n-R5s168-201ENSMUST00000083948 104 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Sox1P53783 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Sox1P53783 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Sox1P53783 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 Gm13301-201ENSMUST00000121728 2446 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Sox1P53783 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Sox1P53783 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Sox1P53783 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox1P53783 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Gm16436-201ENSMUST00000121510 1607 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sox1P53783 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.76□□□□□ -1.33
Sox1P53783 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
Sox1P53783 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox1P53783 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox1P53783 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Sox1P53783 Gm14365-201ENSMUST00000117535 587 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Gm14293-201ENSMUST00000118528 577 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Gm8317-201ENSMUST00000121261 471 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox1P53783 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC6.76□□□□□ -1.33
Sox1P53783 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.76□□□□□ -1.33
Sox1P53783 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.76□□□□□ -1.33
Sox1P53783 Gm25942-201ENSMUST00000180080 110 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Mir7031-201ENSMUST00000183860 65 ntBASIC6.76□□□□□ -1.33
Sox1P53783 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox1P53783 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Gm28061-201ENSMUST00000189085 807 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Gm43224-201ENSMUST00000201567 898 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Gm43105-201ENSMUST00000202987 459 ntBASIC6.76□□□□□ -1.33
Sox1P53783 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox1P53783 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox1P53783 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox1P53783 AC153971.2-201ENSMUST00000214553 777 ntBASIC6.76□□□□□ -1.33
Sox1P53783 AC145736.1-201ENSMUST00000214661 479 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC6.76□□□□□ -1.33
Sox1P53783 Gm18225-201ENSMUST00000216708 742 ntBASIC6.76□□□□□ -1.33
Sox1P53783 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.76□□□□□ -1.33
Sox1P53783 Gm18774-201ENSMUST00000218269 601 ntBASIC6.76□□□□□ -1.33
Sox1P53783 Gm18557-201ENSMUST00000218710 433 ntBASIC6.76□□□□□ -1.33
Sox1P53783 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox1P53783 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox1P53783 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms