Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm22020-201ENSMUST00000104358 136 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm13338-201ENSMUST00000120235 361 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm23534-201ENSMUST00000157539 97 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm22789-201ENSMUST00000157884 130 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm25942-201ENSMUST00000180080 110 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm26925-201ENSMUST00000182470 957 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm5372-201ENSMUST00000187540 409 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.67□□□□□ -1.5
Cxcl12P40224 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.67□□□□□ -1.5
Cxcl12P40224 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.67□□□□□ -1.5
Cxcl12P40224 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cxcl12P40224 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cxcl12P40224 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cxcl12P40224 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.66□□□□□ -1.5
Cxcl12P40224 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Gm11561-201ENSMUST00000117429 417 ntBASIC5.66□□□□□ -1.5
Cxcl12P40224 Gm6382-201ENSMUST00000118873 942 ntBASIC5.66□□□□□ -1.5
Cxcl12P40224 Gm25291-201ENSMUST00000122795 144 ntBASIC5.66□□□□□ -1.5
Cxcl12P40224 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 Gm21850-201ENSMUST00000179792 359 ntBASIC5.66□□□□□ -1.5
Cxcl12P40224 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.66□□□□□ -1.5
Cxcl12P40224 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Gm17994-201ENSMUST00000209260 533 ntBASIC5.66□□□□□ -1.5
Cxcl12P40224 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.66□□□□□ -1.5
Cxcl12P40224 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.66□□□□□ -1.5
Cxcl12P40224 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.66□□□□□ -1.5
Cxcl12P40224 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cxcl12P40224 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.66□□□□□ -1.5
Cxcl12P40224 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cxcl12P40224 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Cxcl12P40224 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm25176-201ENSMUST00000122640 125 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm26153-201ENSMUST00000157433 127 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm23279-201ENSMUST00000157912 97 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm3531-201ENSMUST00000162698 489 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm7316-201ENSMUST00000165395 445 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cxcl12P40224 Mir6410-201ENSMUST00000184204 104 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm36991-201ENSMUST00000191800 648 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cxcl12P40224 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Cxcl12P40224 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm46191-201ENSMUST00000218899 433 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.65□□□□□ -1.5
Cxcl12P40224 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.65□□□□□ -1.5
Cxcl12P40224 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Cxcl12P40224 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Cxcl12P40224 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.65□□□□□ -1.51
Cxcl12P40224 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cxcl12P40224 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.65□□□□□ -1.51
Cxcl12P40224 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cxcl12P40224 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cxcl12P40224 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Cxcl12P40224 Gm44186-201ENSMUST00000204118 2752 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms