Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Traf1P39428 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Traf1P39428 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Traf1P39428 Gm24230-201ENSMUST00000104313 129 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm22499-201ENSMUST00000104501 135 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Traf1P39428 Gm11984-201ENSMUST00000118142 766 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm14769-201ENSMUST00000118590 432 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm13887-201ENSMUST00000119009 344 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.52□□□□□ -1.37
Traf1P39428 Gm23774-201ENSMUST00000158990 131 ntBASIC6.52□□□□□ -1.37
Traf1P39428 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.52□□□□□ -1.37
Traf1P39428 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm18427-201ENSMUST00000195422 515 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.52□□□□□ -1.37
Traf1P39428 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC6.52□□□□□ -1.37
Traf1P39428 Gm38670-201ENSMUST00000199248 77 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.52□□□□□ -1.37
Traf1P39428 Gm44683-201ENSMUST00000209088 484 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm2961-201ENSMUST00000211074 772 ntBASIC6.52□□□□□ -1.37
Traf1P39428 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm4012-201ENSMUST00000221504 581 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm9472-201ENSMUST00000221625 526 ntBASIC6.52□□□□□ -1.37
Traf1P39428 AC153794.2-201ENSMUST00000222650 550 ntBASIC6.52□□□□□ -1.37
Traf1P39428 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.52□□□□□ -1.37
Traf1P39428 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.52□□□□□ -1.37
Traf1P39428 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.52□□□□□ -1.37
Traf1P39428 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.52□□□□□ -1.37
Traf1P39428 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Traf1P39428 Gm6104-201ENSMUST00000078030 603 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Mir331-201ENSMUST00000083673 96 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Traf1P39428 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Traf1P39428 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Traf1P39428 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Traf1P39428 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Traf1P39428 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.52□□□□□ -1.37
Traf1P39428 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Traf1P39428 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.52□□□□□ -1.37
Traf1P39428 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Traf1P39428 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.52□□□□□ -1.37
Traf1P39428 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Traf1P39428 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Traf1P39428 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Traf1P39428 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Traf1P39428 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.51□□□□□ -1.37
Traf1P39428 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Traf1P39428 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.51□□□□□ -1.37
Traf1P39428 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Traf1P39428 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Traf1P39428 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Traf1P39428 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Traf1P39428 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm6175-201ENSMUST00000121351 400 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.51□□□□□ -1.37
Traf1P39428 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.51□□□□□ -1.37
Traf1P39428 Gm26172-201ENSMUST00000158421 134 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm21999-201ENSMUST00000165985 387 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm29489-201ENSMUST00000188934 324 ntBASIC6.51□□□□□ -1.37
Traf1P39428 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Traf1P39428 Gm18348-201ENSMUST00000191227 820 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.51□□□□□ -1.37
Traf1P39428 Gm42776-201ENSMUST00000198031 406 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm9278-201ENSMUST00000205508 553 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm19880-201ENSMUST00000207731 318 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.51□□□□□ -1.37
Traf1P39428 Gm45249-201ENSMUST00000211021 348 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Traf1P39428 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.51□□□□□ -1.37
Traf1P39428 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.51□□□□□ -1.37
Traf1P39428 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.51□□□□□ -1.37
Traf1P39428 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.51□□□□□ -1.37
Traf1P39428 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Traf1P39428 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.51□□□□□ -1.37
Traf1P39428 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Traf1P39428 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.51□□□□□ -1.37
Traf1P39428 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Traf1P39428 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
Traf1P39428 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Gm43317-201ENSMUST00000197924 2544 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Traf1P39428 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Traf1P39428 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Traf1P39428 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Gm12322-201ENSMUST00000121605 389 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Gm24940-201ENSMUST00000158326 108 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Traf1P39428 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.5□□□□□ -1.37
Traf1P39428 Gm4374-201ENSMUST00000204929 424 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms