Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col1a1P11087 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.35□□□□□ -1.39
Col1a1P11087 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col1a1P11087 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.35□□□□□ -1.39
Col1a1P11087 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col1a1P11087 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col1a1P11087 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Col1a1P11087 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Col1a1P11087 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col1a1P11087 Gm7529-201ENSMUST00000213753 1897 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 AC134860.3-201ENSMUST00000223564 1300 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Col1a1P11087 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col1a1P11087 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Col1a1P11087 Gm3931-201ENSMUST00000119038 455 ntBASIC6.34□□□□□ -1.39
Col1a1P11087 Gm16285-201ENSMUST00000162999 347 ntBASIC6.34□□□□□ -1.39
Col1a1P11087 Gm18150-201ENSMUST00000195341 645 ntBASIC6.34□□□□□ -1.39
Col1a1P11087 Gm20586-201ENSMUST00000210122 547 ntBASIC6.34□□□□□ -1.39
Col1a1P11087 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.34□□□□□ -1.39
Col1a1P11087 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col1a1P11087 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.34□□□□□ -1.39
Col1a1P11087 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col1a1P11087 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col1a1P11087 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col1a1P11087 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.34□□□□□ -1.39
Col1a1P11087 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col1a1P11087 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.34□□□□□ -1.39
Col1a1P11087 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col1a1P11087 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col1a1P11087 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col1a1P11087 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col1a1P11087 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col1a1P11087 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Col1a1P11087 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC6.34□□□□□ -1.39
Col1a1P11087 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col1a1P11087 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col1a1P11087 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Col1a1P11087 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.34□□□□□ -1.39
Col1a1P11087 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col1a1P11087 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col1a1P11087 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.34□□□□□ -1.39
Col1a1P11087 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.34□□□□□ -1.4
Col1a1P11087 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Col1a1P11087 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col1a1P11087 Gm13491-201ENSMUST00000118267 235 ntBASIC6.34□□□□□ -1.4
Col1a1P11087 Gm12422-201ENSMUST00000121431 302 ntBASIC6.34□□□□□ -1.4
Col1a1P11087 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col1a1P11087 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Col1a1P11087 Mir1947-201ENSMUST00000158235 85 ntBASIC6.34□□□□□ -1.4
Col1a1P11087 Gm6872-201ENSMUST00000165001 700 ntBASIC6.34□□□□□ -1.4
Col1a1P11087 Gm23631-201ENSMUST00000175291 123 ntBASIC6.34□□□□□ -1.4
Col1a1P11087 Gm28503-201ENSMUST00000185966 147 ntBASIC6.34□□□□□ -1.4
Col1a1P11087 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC6.34□□□□□ -1.4
Col1a1P11087 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.34□□□□□ -1.4
Col1a1P11087 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.34□□□□□ -1.4
Col1a1P11087 Gm22220-201ENSMUST00000082671 149 ntBASIC6.34□□□□□ -1.4
Col1a1P11087 Gm23796-201ENSMUST00000084011 160 ntBASIC6.34□□□□□ -1.4
Col1a1P11087 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.34□□□□□ -1.4
Col1a1P11087 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col1a1P11087 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col1a1P11087 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Col1a1P11087 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Col1a1P11087 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.33□□□□□ -1.4
Col1a1P11087 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Col1a1P11087 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col1a1P11087 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC6.33□□□□□ -1.4
Col1a1P11087 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col1a1P11087 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col1a1P11087 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.33□□□□□ -1.4
Col1a1P11087 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col1a1P11087 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col1a1P11087 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col1a1P11087 Gm37040-201ENSMUST00000191740 1824 ntBASIC6.33□□□□□ -1.4
Col1a1P11087 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col1a1P11087 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Col1a1P11087 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.33□□□□□ -1.4
Col1a1P11087 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Col1a1P11087 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col1a1P11087 Gm26153-201ENSMUST00000157433 127 ntBASIC6.33□□□□□ -1.4
Col1a1P11087 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Col1a1P11087 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.33□□□□□ -1.4
Col1a1P11087 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.33□□□□□ -1.4
Col1a1P11087 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC6.33□□□□□ -1.4
Col1a1P11087 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.33□□□□□ -1.4
Col1a1P11087 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.33□□□□□ -1.4
Col1a1P11087 AV026068-220ENSMUST00000224153 1147 ntBASIC6.33□□□□□ -1.4
Col1a1P11087 AV026068-224ENSMUST00000224827 928 ntBASIC6.33□□□□□ -1.4
Col1a1P11087 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col1a1P11087 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col1a1P11087 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Col1a1P11087 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC6.32□□□□□ -1.4
Col1a1P11087 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms