Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm29284-201ENSMUST00000188363 255 ntBASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm18553-201ENSMUST00000194152 634 ntBASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm38217-201ENSMUST00000194358 910 ntBASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm43116-201ENSMUST00000199789 195 ntBASIC5.9□□□□□ -1.46
Chmp6P0C0A3 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm6520-201ENSMUST00000200636 410 ntBASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm35648-201ENSMUST00000202304 475 ntBASIC5.9□□□□□ -1.46
Chmp6P0C0A3 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.9□□□□□ -1.46
Chmp6P0C0A3 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.9□□□□□ -1.46
Chmp6P0C0A3 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Gm18409-202ENSMUST00000220105 529 ntBASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Chmp6P0C0A3 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Chmp6P0C0A3 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Chmp6P0C0A3 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Chmp6P0C0A3 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.9□□□□□ -1.47
Chmp6P0C0A3 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
Chmp6P0C0A3 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.9□□□□□ -1.47
Chmp6P0C0A3 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Chmp6P0C0A3 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Chmp6P0C0A3 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
Chmp6P0C0A3 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Chmp6P0C0A3 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.9□□□□□ -1.47
Chmp6P0C0A3 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm12131-201ENSMUST00000117479 359 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm14874-201ENSMUST00000118995 438 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm13363-201ENSMUST00000122008 522 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm8061-201ENSMUST00000122380 350 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm27754-201ENSMUST00000183340 126 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Mir6539-201ENSMUST00000183732 110 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Mir7008-201ENSMUST00000184398 63 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Chmp6P0C0A3 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm3943-201ENSMUST00000118606 718 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Mir5110-201ENSMUST00000175537 87 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm28943-201ENSMUST00000186187 615 ntBASIC5.88□□□□□ -1.47
Chmp6P0C0A3 Gm28736-201ENSMUST00000186257 615 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms