Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ccdc180J3QNE4 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccdc180J3QNE4 Gm7416-201ENSMUST00000117448 1487 ntBASIC9.91□□□□□ -0.82
Ccdc180J3QNE4 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Ccdc180J3QNE4 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccdc180J3QNE4 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccdc180J3QNE4 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccdc180J3QNE4 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC9.91□□□□□ -0.82
Ccdc180J3QNE4 Gm25348-201ENSMUST00000158961 111 ntBASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm19186-201ENSMUST00000219922 333 ntBASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Gm2099-202ENSMUST00000223310 3341 ntBASIC9.9□□□□□ -0.82
Ccdc180J3QNE4 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm26146-201ENSMUST00000104478 185 ntBASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm13033-201ENSMUST00000117591 1057 ntBASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm14485-201ENSMUST00000119489 493 ntBASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Trav3-2-201ENSMUST00000198999 305 ntBASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 AC183268.2-201ENSMUST00000214513 446 ntBASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccdc180J3QNE4 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 AC160028.2-201ENSMUST00000218937 2519 ntBASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Dcdc5-202ENSMUST00000122388 4957 ntBASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Gm42662-201ENSMUST00000202539 1431 ntBASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Gm14857-201ENSMUST00000117862 3185 ntBASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Gm18205-201ENSMUST00000209215 841 ntBASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Gm5374-202ENSMUST00000222910 314 ntBASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc180J3QNE4 Gm29293-201ENSMUST00000189416 2188 ntBASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Gm43330-201ENSMUST00000199706 2153 ntBASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Gm22676-201ENSMUST00000116972 129 ntBASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Gm15670-201ENSMUST00000117740 447 ntBASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Mir7028-201ENSMUST00000185016 64 ntBASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Gm43018-201ENSMUST00000198075 1275 ntBASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 AC164597.1-201ENSMUST00000226538 514 ntBASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms