Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC133958.1-201ENSMUST00000227085 961 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm18701-201ENSMUST00000188281 1536 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm9874-202ENSMUST00000194957 1464 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm11889-201ENSMUST00000118402 1079 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm12135-201ENSMUST00000119170 466 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm15311-201ENSMUST00000119682 282 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm15305-201ENSMUST00000120354 288 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm15786-201ENSMUST00000121079 450 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm14728-201ENSMUST00000122196 492 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm9785-202ENSMUST00000144563 593 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm22728-201ENSMUST00000158087 129 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm23025-201ENSMUST00000158769 111 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm25640-201ENSMUST00000175378 125 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm27964-201ENSMUST00000185195 62 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29048-201ENSMUST00000185342 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29403-201ENSMUST00000185491 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28234-201ENSMUST00000185657 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28248-201ENSMUST00000186093 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29633-202ENSMUST00000186217 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28829-201ENSMUST00000186231 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28261-201ENSMUST00000186417 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28815-201ENSMUST00000186751 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28608-201ENSMUST00000186860 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28122-201ENSMUST00000187088 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28420-201ENSMUST00000187340 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28106-201ENSMUST00000187640 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28698-201ENSMUST00000187734 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29224-201ENSMUST00000187965 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29189-201ENSMUST00000188018 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29281-201ENSMUST00000188077 381 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29476-201ENSMUST00000188397 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29505-201ENSMUST00000188424 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28125-201ENSMUST00000188470 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29391-201ENSMUST00000188545 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29280-201ENSMUST00000188571 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28349-201ENSMUST00000188590 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29652-201ENSMUST00000188622 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28819-206ENSMUST00000188816 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29079-201ENSMUST00000188875 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28213-201ENSMUST00000189183 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29382-201ENSMUST00000189549 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29377-205ENSMUST00000189603 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28327-201ENSMUST00000189638 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28790-201ENSMUST00000189642 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28907-201ENSMUST00000189700 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29586-207ENSMUST00000189745 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29115-201ENSMUST00000189870 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28366-201ENSMUST00000190147 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29212-201ENSMUST00000190384 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29533-201ENSMUST00000190403 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28162-201ENSMUST00000190545 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29030-201ENSMUST00000190848 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28742-201ENSMUST00000191001 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28899-201ENSMUST00000191161 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29567-201ENSMUST00000191188 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28222-201ENSMUST00000191210 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28776-201ENSMUST00000191282 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29306-201ENSMUST00000191366 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29618-201ENSMUST00000191423 615 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms