Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm44237-201ENSMUST00000205183 936 ntBASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm25764-201ENSMUST00000104092 134 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm24739-201ENSMUST00000158855 292 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm15500-201ENSMUST00000071523 894 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm37233-201ENSMUST00000192173 6263 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm15772-201ENSMUST00000118533 438 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm4487-201ENSMUST00000150617 442 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm23354-201ENSMUST00000158426 104 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm4036-201ENSMUST00000220842 626 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 n-R5s166-201ENSMUST00000082898 121 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 AC156636.1-201ENSMUST00000218639 2229 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm25843-201ENSMUST00000122582 314 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm20453-201ENSMUST00000173968 226 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm8941-201ENSMUST00000181451 899 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm17956-201ENSMUST00000199931 838 ntBASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.19□□□□□ -1.58
Col6a3E9PWQ3 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm11325-201ENSMUST00000119967 469 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm16558-201ENSMUST00000163015 532 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm27414-201ENSMUST00000185033 381 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm14067-201ENSMUST00000119340 314 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm12852-201ENSMUST00000119478 719 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm12115-201ENSMUST00000119969 447 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm15388-201ENSMUST00000121578 726 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm4725-201ENSMUST00000151048 587 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm8939-201ENSMUST00000192577 964 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm31306-201ENSMUST00000197517 508 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm17994-201ENSMUST00000209260 533 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Gm18628-201ENSMUST00000220584 475 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a3E9PWQ3 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms