Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm42643-201ENSMUST00000200504 279 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm42930-201ENSMUST00000200872 3260 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm45633-201ENSMUST00000210669 3253 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 AC144772.2-201ENSMUST00000228830 2859 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm37076-201ENSMUST00000192033 2294 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm15670-201ENSMUST00000117740 447 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm15840-201ENSMUST00000122099 943 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm26153-201ENSMUST00000157433 127 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm7990-201ENSMUST00000212126 593 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 AC153961.1-201ENSMUST00000217760 385 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 AC091783.2-201ENSMUST00000224626 740 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.56□□□□□ -1.68
Col6a4A2AX52 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Col6a4A2AX52 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm37078-201ENSMUST00000193314 2009 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm43328-201ENSMUST00000198544 1434 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm16082-201ENSMUST00000115992 377 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm16589-201ENSMUST00000159522 918 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm10784-201ENSMUST00000178715 238 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm4714-201ENSMUST00000203395 279 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm44673-201ENSMUST00000205692 996 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm14367-201ENSMUST00000119214 1497 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm37967-201ENSMUST00000195634 2665 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm23023-201ENSMUST00000158767 109 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm29736-201ENSMUST00000198189 385 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm2059-201ENSMUST00000212025 287 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm8942-201ENSMUST00000217892 400 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col6a4A2AX52 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm25139-201ENSMUST00000083247 210 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Gm23795-201ENSMUST00000084006 137 ntBASIC4.55□□□□□ -1.68
Col6a4A2AX52 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col6a4A2AX52 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms