Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm24043-201ENSMUST00000083108 116 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm26176-201ENSMUST00000083795 105 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm14248-201ENSMUST00000117790 544 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm14986-201ENSMUST00000121262 1002 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm6031-201ENSMUST00000121314 1054 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm14156-201ENSMUST00000121538 483 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm22480-201ENSMUST00000122568 128 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm15899-201ENSMUST00000128586 238 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm24782-201ENSMUST00000157641 132 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm22882-201ENSMUST00000157749 124 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm16027-201ENSMUST00000161618 758 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm26729-201ENSMUST00000180744 352 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm26925-201ENSMUST00000182470 957 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm26993-201ENSMUST00000182766 789 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm28116-201ENSMUST00000189064 387 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm21577-201ENSMUST00000190823 697 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm7341-201ENSMUST00000192183 926 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm37295-201ENSMUST00000192186 109 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm42558-201ENSMUST00000200982 265 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm43812-202ENSMUST00000202701 581 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm44623-201ENSMUST00000207934 434 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 AV026068-229ENSMUST00000225516 595 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim39Q9ESN2 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Trim39Q9ESN2 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.52□□□□□ -1.36
Trim39Q9ESN2 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Trim39Q9ESN2 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms