Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm19060-201ENSMUST00000201959 421 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm18482-201ENSMUST00000202405 760 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm8719-201ENSMUST00000203602 534 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm7890-201ENSMUST00000204877 601 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm8526-201ENSMUST00000079153 475 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lima1Q9ERG0 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm15185-201ENSMUST00000117397 746 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm13503-201ENSMUST00000119017 446 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm22959-201ENSMUST00000122514 303 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm24465-201ENSMUST00000178398 107 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm27460-201ENSMUST00000184213 100 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm27210-201ENSMUST00000184263 402 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm18177-201ENSMUST00000188373 404 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.31□□□□□ -1.56
Lima1Q9ERG0 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm25595-201ENSMUST00000102273 97 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm5073-201ENSMUST00000118222 820 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm14769-201ENSMUST00000118590 432 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm16016-201ENSMUST00000120831 550 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm12413-201ENSMUST00000121508 312 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm13077-201ENSMUST00000121941 484 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm29161-201ENSMUST00000188250 699 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm37235-201ENSMUST00000195171 59 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Gm44580-201ENSMUST00000206333 877 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.3□□□□□ -1.56
Lima1Q9ERG0 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC5.3□□□□□ -1.56
Lima1Q9ERG0 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 161.1 ms