Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm13924-201ENSMUST00000119899 486 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm16125-201ENSMUST00000159003 339 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm22993-201ENSMUST00000175423 254 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm26238-201ENSMUST00000175538 117 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Use1Q9CQ56 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm37024-201ENSMUST00000192224 868 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm42428-201ENSMUST00000198677 302 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm31861-201ENSMUST00000204563 672 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm7890-201ENSMUST00000204877 601 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm4822-201ENSMUST00000077551 479 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.17□□□□□ -1.58
Use1Q9CQ56 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Use1Q9CQ56 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm14529-201ENSMUST00000117894 406 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm3931-201ENSMUST00000119038 455 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm13473-201ENSMUST00000119289 367 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm14620-201ENSMUST00000120656 383 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Mir6361-201ENSMUST00000185079 101 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm44580-201ENSMUST00000206333 877 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm4083-201ENSMUST00000207158 451 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.16□□□□□ -1.58
Use1Q9CQ56 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Use1Q9CQ56 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Use1Q9CQ56 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Use1Q9CQ56 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Use1Q9CQ56 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms