Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm19086-201ENSMUST00000190772 665 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm22897-202ENSMUST00000197782 127 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm43973-201ENSMUST00000203562 210 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm44239-201ENSMUST00000204228 271 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm12281-201ENSMUST00000119536 298 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm22959-201ENSMUST00000122514 303 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm8941-201ENSMUST00000181451 899 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm27219-201ENSMUST00000184633 742 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm28660-201ENSMUST00000186496 253 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm18799-201ENSMUST00000189104 913 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm9317-201ENSMUST00000197055 862 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm29745-201ENSMUST00000198005 687 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm43596-201ENSMUST00000202818 884 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm8319-201ENSMUST00000205708 641 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Lsm1Q8VC85 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm13428-201ENSMUST00000117540 365 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm11908-201ENSMUST00000117755 347 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm15078-201ENSMUST00000118371 782 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm16420-201ENSMUST00000120258 856 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm11882-201ENSMUST00000121463 506 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm14587-201ENSMUST00000121714 658 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm26046-201ENSMUST00000157312 166 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm23386-201ENSMUST00000158585 144 ntBASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lsm1Q8VC85 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms