Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm24434-201ENSMUST00000104081 132 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm25065-201ENSMUST00000177914 132 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm25891-201ENSMUST00000180050 132 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm17790-201ENSMUST00000191545 1228 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm37682-201ENSMUST00000191776 522 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm37355-201ENSMUST00000193345 606 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm37871-201ENSMUST00000194973 688 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm5694-201ENSMUST00000195648 641 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm19880-201ENSMUST00000207731 318 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm18997-201ENSMUST00000216353 822 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm19189-201ENSMUST00000221689 754 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm24032-201ENSMUST00000083932 159 ntBASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc28bQ8CEG5 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc28bQ8CEG5 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm11271-201ENSMUST00000116054 440 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm13176-201ENSMUST00000117910 477 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm6427-201ENSMUST00000118721 979 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm15057-201ENSMUST00000121516 534 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm7309-201ENSMUST00000121670 581 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Mir3473a-201ENSMUST00000175011 78 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm23806-201ENSMUST00000175157 109 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm10410-201ENSMUST00000180138 384 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm26898-201ENSMUST00000181678 384 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm21617-201ENSMUST00000188297 691 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm43316-201ENSMUST00000197252 1295 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 AC158388.1-201ENSMUST00000225441 256 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Gm5612-201ENSMUST00000053326 375 ntBASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc28bQ8CEG5 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms