Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm44214-201ENSMUST00000204153 606 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm44134-202ENSMUST00000204777 545 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm17992-201ENSMUST00000207346 1072 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm18850-201ENSMUST00000211578 388 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm20368-201ENSMUST00000220716 301 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 AC154450.1-201ENSMUST00000220911 485 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 AC165953.1-201ENSMUST00000226386 357 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp47Q8BY87 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm24706-201ENSMUST00000082806 137 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm42531-201ENSMUST00000201648 4048 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm43788-201ENSMUST00000201539 2417 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm9077-201ENSMUST00000210657 2298 ntBASIC7.63□□□□□ -1.19
Usp47Q8BY87 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Usp47Q8BY87 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Gm9429-201ENSMUST00000117804 868 ntBASIC7.62□□□□□ -1.19
Usp47Q8BY87 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Gm4831-201ENSMUST00000174626 594 ntBASIC7.62□□□□□ -1.19
Usp47Q8BY87 Mir7028-201ENSMUST00000185016 64 ntBASIC7.62□□□□□ -1.19
Usp47Q8BY87 Gm2950-201ENSMUST00000185530 520 ntBASIC7.62□□□□□ -1.19
Usp47Q8BY87 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC7.62□□□□□ -1.19
Usp47Q8BY87 Gm37882-201ENSMUST00000195254 196 ntBASIC7.62□□□□□ -1.19
Usp47Q8BY87 Ighv1-35-201ENSMUST00000195265 351 ntBASIC7.62□□□□□ -1.19
Usp47Q8BY87 Gm37445-201ENSMUST00000195318 242 ntBASIC7.62□□□□□ -1.19
Usp47Q8BY87 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp47Q8BY87 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Gm43333-201ENSMUST00000198340 2262 ntBASIC7.62□□□□□ -1.19
Usp47Q8BY87 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Usp47Q8BY87 AC154354.1-201ENSMUST00000224585 2109 ntBASIC7.62□□□□□ -1.19
Usp47Q8BY87 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
Usp47Q8BY87 Gm43130-201ENSMUST00000197721 3907 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp47Q8BY87 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Gm22676-201ENSMUST00000116972 129 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Gm18800-202ENSMUST00000188688 1105 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 Gm37581-201ENSMUST00000192371 988 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Usp47Q8BY87 AC155922.1-201ENSMUST00000220100 373 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp47Q8BY87 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp47Q8BY87 AC156576.2-202ENSMUST00000222525 411 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 AC154576.2-203ENSMUST00000224736 253 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms