Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc40Q8BI79 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc40Q8BI79 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc40Q8BI79 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc40Q8BI79 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc40Q8BI79 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc40Q8BI79 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc40Q8BI79 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm24709-201ENSMUST00000104123 132 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Snord65-201ENSMUST00000104269 72 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm10241-201ENSMUST00000117664 286 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm10177-201ENSMUST00000160052 444 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm43033-201ENSMUST00000199682 425 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm9278-201ENSMUST00000205508 553 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm5830-201ENSMUST00000049117 443 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Olfr467-201ENSMUST00000084756 927 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc40Q8BI79 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm11105-201ENSMUST00000112781 478 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm26069-201ENSMUST00000157497 277 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm23855-201ENSMUST00000158377 135 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm21772-201ENSMUST00000169213 478 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm9597-201ENSMUST00000171913 602 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm17126-201ENSMUST00000172276 523 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm2058-201ENSMUST00000178791 560 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm8874-201ENSMUST00000196826 286 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm42886-201ENSMUST00000199214 466 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm19596-201ENSMUST00000203685 739 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm44768-201ENSMUST00000205719 393 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm18205-201ENSMUST00000209215 841 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm7990-201ENSMUST00000212126 593 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm18329-201ENSMUST00000215832 589 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm19186-201ENSMUST00000219922 333 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm8672-201ENSMUST00000221200 332 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Gm272-201ENSMUST00000222073 919 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Olfr519-201ENSMUST00000084752 960 ntBASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc40Q8BI79 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Ccdc40Q8BI79 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms