Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm23979-201ENSMUST00000104071 128 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm8692-201ENSMUST00000118102 438 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm13690-201ENSMUST00000118989 285 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm14600-201ENSMUST00000121032 630 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm6067-201ENSMUST00000121648 491 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm23111-201ENSMUST00000122652 105 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm25660-201ENSMUST00000158470 104 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm25713-201ENSMUST00000158625 109 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm43063-201ENSMUST00000198198 1081 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm45343-201ENSMUST00000210452 828 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm9535-201ENSMUST00000218499 768 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 n-R5s41-201ENSMUST00000083025 119 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm10205-201ENSMUST00000087431 234 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Gm28047Q3US59 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.18□□□□□ -1.26
Gm28047Q3US59 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 AC121960.2-201ENSMUST00000227349 3446 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm42892-201ENSMUST00000196227 3973 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm25785-201ENSMUST00000104129 125 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm12587-201ENSMUST00000120180 427 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Gm28047Q3US59 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm13194-201ENSMUST00000142299 311 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm23954-201ENSMUST00000157213 353 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm9127-201ENSMUST00000188041 985 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm4856-201ENSMUST00000192696 1091 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm7626-201ENSMUST00000195801 353 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm6070-201ENSMUST00000207275 419 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm29817-201ENSMUST00000210098 172 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC7.17□□□□□ -1.26
Gm28047Q3US59 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm2829-201ENSMUST00000213121 499 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm18899-201ENSMUST00000217663 546 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC7.17□□□□□ -1.26
Gm28047Q3US59 AC154329.2-201ENSMUST00000225257 383 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 CT009527.2-201ENSMUST00000225386 606 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 AC154806.3-201ENSMUST00000227376 439 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 AC154806.4-201ENSMUST00000227406 439 ntBASIC7.17□□□□□ -1.26
Gm28047Q3US59 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Gm28047Q3US59 Gm24695-201ENSMUST00000083877 83 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms