Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm26172-201ENSMUST00000158421 134 ntBASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Gm20401-201ENSMUST00000173717 212 ntBASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Gm28885-201ENSMUST00000185615 563 ntBASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Gm18587-201ENSMUST00000213736 841 ntBASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Mir711-201ENSMUST00000102188 82 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm13579-201ENSMUST00000118519 517 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm11761-201ENSMUST00000121392 445 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm16260-201ENSMUST00000155141 304 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Mir6417-201ENSMUST00000183815 116 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm37444-201ENSMUST00000193605 439 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm38670-201ENSMUST00000199248 77 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm43054-201ENSMUST00000199495 884 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm45700-201ENSMUST00000205866 347 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm22456-201ENSMUST00000082578 125 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm23511-201ENSMUST00000083084 164 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Upf3bQ3ULL6 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm6134-201ENSMUST00000117265 171 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm14836-201ENSMUST00000118567 471 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm11699-201ENSMUST00000119016 401 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm15152-201ENSMUST00000121540 394 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm26086-201ENSMUST00000157902 263 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm24940-201ENSMUST00000158326 108 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm17223-201ENSMUST00000171413 481 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Mir6539-201ENSMUST00000183732 110 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm38122-201ENSMUST00000192679 885 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm19921-201ENSMUST00000210505 703 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms