Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Gm22804-201ENSMUST00000158052 101 ntBASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Gm8256-201ENSMUST00000169178 453 ntBASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Gm22420-201ENSMUST00000178795 126 ntBASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Gm38670-201ENSMUST00000199248 77 ntBASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Gm17984-201ENSMUST00000205286 859 ntBASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Gm25139-201ENSMUST00000083247 210 ntBASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ctdnep1Q3TP92 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm13311-201ENSMUST00000117863 379 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm13077-201ENSMUST00000121941 484 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm24295-201ENSMUST00000158298 131 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm24175-201ENSMUST00000158931 129 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm29664-201ENSMUST00000191125 463 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm5285-201ENSMUST00000193089 666 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm38011-201ENSMUST00000193312 279 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm8719-201ENSMUST00000203602 534 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm44307-201ENSMUST00000204466 764 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm45874-201ENSMUST00000212423 346 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm22456-201ENSMUST00000082578 125 ntBASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ctdnep1Q3TP92 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm37357-201ENSMUST00000192386 3123 ntBASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm15428-201ENSMUST00000121352 333 ntBASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 n-R5s61-201ENSMUST00000122711 118 ntBASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm23354-201ENSMUST00000158426 104 ntBASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm25660-201ENSMUST00000158470 104 ntBASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm27528-201ENSMUST00000183544 205 ntBASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Ctdnep1Q3TP92 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms