Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Col17a1Q07563 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Col17a1Q07563 Gm5746-201ENSMUST00000183550 2200 ntBASIC8.63□□□□□ -1.03
Col17a1Q07563 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Col17a1Q07563 Gm16420-201ENSMUST00000120258 856 ntBASIC8.63□□□□□ -1.03
Col17a1Q07563 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col17a1Q07563 Gm14905-201ENSMUST00000122351 639 ntBASIC8.63□□□□□ -1.03
Col17a1Q07563 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col17a1Q07563 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Col17a1Q07563 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Col17a1Q07563 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col17a1Q07563 Gm28941-201ENSMUST00000185536 1017 ntBASIC8.63□□□□□ -1.03
Col17a1Q07563 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Col17a1Q07563 Gm17847-201ENSMUST00000188261 1127 ntBASIC8.63□□□□□ -1.03
Col17a1Q07563 Gm7299-201ENSMUST00000194441 581 ntBASIC8.63□□□□□ -1.03
Col17a1Q07563 Gm44852-201ENSMUST00000207950 369 ntBASIC8.63□□□□□ -1.03
Col17a1Q07563 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col17a1Q07563 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.63□□□□□ -1.03
Col17a1Q07563 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Col17a1Q07563 Gm44039-201ENSMUST00000204192 2246 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Col17a1Q07563 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC8.62□□□□□ -1.03
Col17a1Q07563 AC093022.3-201ENSMUST00000226569 1926 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Col17a1Q07563 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm11488-201ENSMUST00000117277 863 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm5473-201ENSMUST00000179326 642 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC8.62□□□□□ -1.03
Col17a1Q07563 Ighv6-2-201ENSMUST00000192430 295 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm7721-201ENSMUST00000200446 546 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm45236-201ENSMUST00000208632 229 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm7368-201ENSMUST00000213307 367 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 AC147628.1-201ENSMUST00000228193 688 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 n-R5s62-201ENSMUST00000082780 96 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Snord22-201ENSMUST00000083153 126 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Col17a1Q07563 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Col17a1Q07563 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Col17a1Q07563 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Col17a1Q07563 Gm9597-202ENSMUST00000227632 1387 ntBASIC8.62□□□□□ -1.03
Col17a1Q07563 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col17a1Q07563 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Col17a1Q07563 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col17a1Q07563 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col17a1Q07563 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col17a1Q07563 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC8.61□□□□□ -1.03
Col17a1Q07563 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col17a1Q07563 Gm16394-201ENSMUST00000117289 675 ntBASIC8.61□□□□□ -1.03
Col17a1Q07563 Gm14755-201ENSMUST00000118037 384 ntBASIC8.61□□□□□ -1.03
Col17a1Q07563 Gm11931-201ENSMUST00000121630 447 ntBASIC8.61□□□□□ -1.03
Col17a1Q07563 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC8.61□□□□□ -1.03
Col17a1Q07563 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC8.61□□□□□ -1.03
Col17a1Q07563 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col17a1Q07563 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col17a1Q07563 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col17a1Q07563 Olfr151-202ENSMUST00000221099 929 ntBASIC8.61□□□□□ -1.03
Col17a1Q07563 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Col17a1Q07563 Gm42548-201ENSMUST00000202669 3933 ntBASIC8.61□□□□□ -1.03
Col17a1Q07563 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Col17a1Q07563 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
Col17a1Q07563 Gm5182-201ENSMUST00000217708 6092 ntBASIC8.61□□□□□ -1.03
Col17a1Q07563 AC122346.1-201ENSMUST00000225266 3732 ntBASIC8.61□□□□□ -1.03
Col17a1Q07563 Gm18163-201ENSMUST00000197877 1643 ntBASIC8.61□□□□□ -1.03
Col17a1Q07563 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC8.61□□□□□ -1.03
Col17a1Q07563 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Col17a1Q07563 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm45290-201ENSMUST00000211177 3890 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm24350-201ENSMUST00000104163 133 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm13973-201ENSMUST00000121371 894 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm11233-201ENSMUST00000122357 634 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm17149-201ENSMUST00000164712 375 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm28438-201ENSMUST00000188299 345 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm28443-201ENSMUST00000189081 698 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm28769-201ENSMUST00000190176 615 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm43418-201ENSMUST00000201334 428 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Gm43629-201ENSMUST00000201782 704 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col17a1Q07563 AC153522.1-201ENSMUST00000220047 1090 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 CT010486.1-201ENSMUST00000224609 422 ntBASIC8.6□□□□□ -1.03
Col17a1Q07563 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms