Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm28949-201ENSMUST00000187805 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28773-201ENSMUST00000187925 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm29422-201ENSMUST00000188062 694 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28787-201ENSMUST00000188357 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm29451-201ENSMUST00000188862 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm29033-201ENSMUST00000189114 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm29614-201ENSMUST00000189263 694 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28751-201ENSMUST00000189287 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm29559-201ENSMUST00000189412 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28272-201ENSMUST00000189512 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28483-201ENSMUST00000189519 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28123-201ENSMUST00000189725 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28368-201ENSMUST00000189804 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm29119-201ENSMUST00000189973 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28716-201ENSMUST00000190217 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm29239-201ENSMUST00000190304 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28837-201ENSMUST00000190397 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28531-201ENSMUST00000190529 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm28165-201ENSMUST00000190669 694 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm37511-201ENSMUST00000192901 294 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm32347-201ENSMUST00000192944 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm37990-201ENSMUST00000195821 696 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.21□□□□□ -1.42
Msx2Q03358 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.21□□□□□ -1.42
Msx2Q03358 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC6.21□□□□□ -1.42
Msx2Q03358 CT030030.1-201ENSMUST00000218809 152 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.21□□□□□ -1.42
Msx2Q03358 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 AC154532.2-201ENSMUST00000228947 598 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Msx2Q03358 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msx2Q03358 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Msx2Q03358 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Msx2Q03358 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msx2Q03358 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Msx2Q03358 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Msx2Q03358 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Gm24765-201ENSMUST00000083691 103 ntBASIC6.21□□□□□ -1.42
Msx2Q03358 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msx2Q03358 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msx2Q03358 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Msx2Q03358 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msx2Q03358 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msx2Q03358 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msx2Q03358 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Msx2Q03358 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.21□□□□□ -1.42
Msx2Q03358 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Msx2Q03358 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Msx2Q03358 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msx2Q03358 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msx2Q03358 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Msx2Q03358 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Msx2Q03358 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Naip3-201ENSMUST00000118082 4208 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msx2Q03358 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msx2Q03358 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm15108-201ENSMUST00000116160 803 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm7129-201ENSMUST00000117402 997 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm15021-201ENSMUST00000117832 742 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm12937-201ENSMUST00000118333 448 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm12040-201ENSMUST00000118357 537 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm12219-201ENSMUST00000119198 443 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm15019-201ENSMUST00000120148 434 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm13602-201ENSMUST00000122405 493 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm22755-201ENSMUST00000157143 100 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm9672-201ENSMUST00000166437 425 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm7502-201ENSMUST00000169235 733 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Mir3072-201ENSMUST00000175610 83 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC6.2□□□□□ -1.42
Msx2Q03358 Mir6348-201ENSMUST00000183804 120 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Mir6241-201ENSMUST00000184225 103 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm28343-201ENSMUST00000185386 112 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.2□□□□□ -1.42
Msx2Q03358 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Msx2Q03358 Gm37996-201ENSMUST00000191859 367 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm19694-201ENSMUST00000192364 505 ntBASIC6.2□□□□□ -1.42
Msx2Q03358 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms