Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm25430-201ENSMUST00000157614 289 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm24860-201ENSMUST00000158457 276 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm17907-201ENSMUST00000173150 710 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm20545-201ENSMUST00000174739 210 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm22917-201ENSMUST00000180116 110 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm17981-201ENSMUST00000191109 739 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm37436-201ENSMUST00000193842 1085 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm42461-201ENSMUST00000198627 1150 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm18904-201ENSMUST00000218756 329 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm38118-201ENSMUST00000192052 2222 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm44660-201ENSMUST00000207134 2465 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm43361-201ENSMUST00000196562 4690 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm43437-201ENSMUST00000198535 3955 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm43891-201ENSMUST00000205132 3112 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm11774-201ENSMUST00000118601 293 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm15152-201ENSMUST00000121540 394 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Mir1945-201ENSMUST00000157919 78 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm4831-201ENSMUST00000174626 594 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Mir6343-201ENSMUST00000183584 84 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm29489-201ENSMUST00000188934 324 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm37716-201ENSMUST00000193553 947 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm44108-201ENSMUST00000203525 422 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm2011-203ENSMUST00000203750 435 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm45405-201ENSMUST00000211544 609 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm7887-201ENSMUST00000056948 537 ntBASIC4.81□□□□□ -1.64
Nkx3-1P97436 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Nkx3-1P97436 Gm5594-201ENSMUST00000172712 1429 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm19514-201ENSMUST00000206856 4489 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm42781-201ENSMUST00000201317 2719 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm23839-201ENSMUST00000116957 109 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm12813-201ENSMUST00000119615 902 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm15803-201ENSMUST00000120118 394 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm23279-201ENSMUST00000157912 97 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms